Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927068.1_cds_XP_016474970.1_66945
CDS Infomation

[gene=LOC107796685] [db_xref=GeneID:107796685] [protein=pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like] [protein_id=XP_016474970.1] [location=join(21497..21791,23077..24290)] [gbkey=CDS]
Sequence

ATGCTCTATCGCTTCATCTCAAAATCTTCACACCCCCTATTGCTAACCCTAGTTTCCTCC
AAAACCCACTTCTTAAACCCTAAATCCTCATTTTCCATTCCCAAGCGTAATTTCTTTCCC
AACAACTCCTTTTTCTTCTCCACAGGTAACAACAATGGCAAAGATTCAGACCCTTTATAT
ACTTGGAAGCTCTCTTCTGAAACTGATGAATCAGCGTTCAATGAATATTCAGCAAGTGTT
GAGGGAACAGAAAGACGGGTTTTTGATGGTGGGTTTTGGTCTAAACAACTTAAAGGTTCT
TGTACTGATGAATTGACAATCAAAAAGAGTGGACTTAGTAAGCCTTCGGTAAGTGTGTAT
TCAGAAAAAACTTTGGAAACAATTGAGATTCTCAAGGGTGGTGGGGAAGACTTGACGCAC
AGGTTAAGTTTGGTGGCTCCAAAACTATCATTCAAGCTCATCATTGAGATTTTTGAGCGT
GTGAATGAACAAAGAATATCTGGATTAAAGTTCTTTAATTGGCTTCGAGACTCGTATCCT
GAATTTTATCGCAGTGCTTATGTCAATAGTCTGATTATATGTAATTGTGGATTGTTAGAT
GACTATAAAACAATGCTCTCTTTGTTGGTAGAGTTTAAGGCAGAAGAAATTTGTTTAACT
GATAAGGCTTTTGGGTTCTTAACTTTATGTGGATCGAGTAAGGATTCATTGATGAATTCT
ACAAGGAAAGTGGTTGATATGATAAATGAGATTGGAGGATCCTGTCGTGGTTCTGGTGTT
TATGGATTAATCGAGATGTTCTGTTGCTTGGACTTATTCGATATGGCAACATTTGTAATA
GAGATCACTGAAAGAACAGCTTCTCACTACAATATTTTGATCCGTAAGAGGTGTAAGGCA
GGCCACATTGAAGAAGCACGCGCTATTATCAACGAGATGTTTGAATTTGGTTGTTCTCCT
AACACCAATTCATATAACTACCTGCTTGGCACATTGTGTAAGAATGATAAGATGGAAGAT
GTGTCTATTGTGCTCGAAGAAATGAGAAATAAGGGTCTCAATCTAGATGCAATAACTTAT
GAAACTCTAGTATATCATTCATCTAGCCGTGGTCGGGTTGACATTGCCTCCGAATTTTTG
AAGTTGATGGTAAATGAGAATGTGGAACCTCGTTCTACTACTCATGCTGCCTATCTTAAG
GTTTTGCTTGAGGCGGGAGAGCGTGAGAAAGCATATAAGTATGTGATTGACATGAGCGCC
AAATATAACCACTGTGTCAATGTACTATACAGCTTGCTGGTGAGGCTTCATCAGAAGAAA
GGAGATCTTATGACTGCTCAAAACATTCTTAATGAAATGATTGACAAGGGTCTCAAGCCG
GACTTTGGAGTTTTCATTGAAATTGTAAAGCAGCTCCAGAAGACGGGCAGGAAATCTATA
TCTCGAGATCTTAGGACCAAATACTCAGTTTTCTATTGTAGTGACATACAAAAAGCTAGC
AATTCTTAA

Peptide Sequence

PEP ID

XP_016474970.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Nicotiana tabacum]
Sequence

MLYRFISKSSHPLLLTLVSSKTHFLNPKSSFSIPKRNFFPNNSFFFSTGNNNGKDSDPLY
TWKLSSETDESAFNEYSASVEGTERRVFDGGFWSKQLKGSCTDELTIKKSGLSKPSVSVY
SEKTLETIEILKGGGEDLTHRLSLVAPKLSFKLIIEIFERVNEQRISGLKFFNWLRDSYP
EFYRSAYVNSLIICNCGLLDDYKTMLSLLVEFKAEEICLTDKAFGFLTLCGSSKDSLMNS
TRKVVDMINEIGGSCRGSGVYGLIEMFCCLDLFDMATFVIEITERTASHYNILIRKRCKA
GHIEEARAIINEMFEFGCSPNTNSYNYLLGTLCKNDKMEDVSIVLEEMRNKGLNLDAITY
ETLVYHSSSRGRVDIASEFLKLMVNENVEPRSTTHAAYLKVLLEAGEREKAYKYVIDMSA
KYNHCVNVLYSLLVRLHQKKGDLMTAQNILNEMIDKGLKPDFGVFIEIVKQLQKTGRKSI
SRDLRTKYSVFYCSDIQKASNS

Transcript Sequence

Gene sequence data has not been registered.